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EML2-AS1 EML2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100287177, updated on 25-Jan-2022

Summary

Official Symbol
EML2-AS1provided by HGNC
Official Full Name
EML2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:48331
See related
Ensembl:ENSG00000267757 AllianceGenome:HGNC:48331
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C19orf83
Expression
Broad expression in brain (RPKM 1.8), testis (RPKM 1.4) and 20 other tissues See more
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Genomic context

See EML2-AS1 in Genome Data Viewer
Location:
19q13.32
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (45641494..45642840)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (46144752..46146098)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene EMAP like 2 Neighboring gene Sharpr-MPRA regulatory region 4040 Neighboring gene microRNA 330 Neighboring gene RNA, 7SL, cytoplasmic 836, pseudogene Neighboring gene gastric inhibitory polypeptide receptor Neighboring gene microRNA 642a Neighboring gene microRNA 642b

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_130728.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC098776, BC007358, BI334767
    Related
    ENST00000623430.1
  2. NR_130729.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, compared to variant 1.
    Source sequence(s)
    AC098776, BI334767, CA424540
    Related
    ENST00000591087.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    45641494..45642840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001242348.1: Suppressed sequence

    Description
    NM_001242348.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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