U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPM1F-AS1 PPM1F antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100286925, updated on 13-May-2022

Summary

Official Symbol
PPM1F-AS1provided by HGNC
Official Full Name
PPM1F antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40888
See related
AllianceGenome:HGNC:40888
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PPM1F-AS1 in Genome Data Viewer
Location:
22q11.22
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (21938237..21943434)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (22351769..22356965)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (22292609..22297806)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 14215 Neighboring gene RNA, 5S ribosomal pseudogene 493 Neighboring gene mitogen-activated protein kinase 1 Neighboring gene Sharpr-MPRA regulatory region 76 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1F Neighboring gene DNA topoisomerase III beta Neighboring gene PRAME N-terminal like, pseudogene Neighboring gene immunoglobulin lambda variable (I)-70 (pseudogene) Neighboring gene immunoglobulin lambda locus

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147620.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC245452

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    21938237..21943434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    22351769..22356965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)