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pimt Protein-L-isoaspartateD-aspartate O-methyltransferase [ Salmo salar (Atlantic salmon) ]

Gene ID: 100286698, updated on 12-Mar-2017

Summary

Gene symbol
pimt
Gene description
Protein-L-isoaspartateD-aspartate O-methyltransferase
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo

Genomic context

See pimt in Genome Data Viewer
Location:
chromosome: ssa09
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ICSASG_v2 (GCF_000233375.1) ssa09 NC_027308.1 (5640809..5649602)

Chromosome ssa09 - NC_027308.1Genomic Context describing neighboring genes Neighboring gene bromo adjacent homology domain-containing 1 protein-like Neighboring gene uncharacterized protein C15orf57 homolog Neighboring gene RNA pseudouridylate synthase domain-containing protein 2-like Neighboring gene protein dispatched homolog 2-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_027308.1 Chromosome ssa09 Reference ICSASG_v2 Primary Assembly

General protein information

Preferred Names
Protein-L-isoaspartateD-aspartate O-methyltransferase; protein-L-isoaspartateD-aspartate O-methyltransferase

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001146639.1NP_001140111.1  Protein-L-isoaspartateD-aspartate O-methyltransferase precursor

    See identical proteins and their annotated locations for NP_001140111.1

    Status: PROVISIONAL

    Source sequence(s)
    BT057898
    UniProtKB/TrEMBL
    B9EQH3
    Conserved Domains (2) summary
    pfam01135
    Location:30237
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    cl17173
    Location:34239
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ICSASG_v2 Primary Assembly

Genomic

  1. NC_027308.1 Reference ICSASG_v2 Primary Assembly

    Range
    5640809..5649602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014209962.1XP_014065437.1  protein-L-isoaspartateD-aspartate O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    B9EQH3
    Conserved Domains (2) summary
    pfam01135
    Location:30237
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
    cl17173
    Location:34239
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
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