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LOC100285082 KOB1 [ Zea mays ]

Gene ID: 100285082, updated on 27-Nov-2024

Summary

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Gene symbol
LOC100285082
Gene description
KOB1
Locus tag
ZEAMMB73_Zm00001d039284
See related
EnsemblRapid:Zm00001eb119140
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G123540
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Genomic context

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See LOC100285082 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 3 NC_050098.1 (1846307..1851093)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 3 NC_024461.2 (1009367..1014150)

Chromosome 3 - NC_050098.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase RHS3 Neighboring gene Plasma membrane-associated cation-binding protein 1 Neighboring gene putative ubiquitin-conjugating enzyme E2 25 Neighboring gene uncharacterized LOC103649540

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to abscisic acid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KOB1
Names
Glycosyltransferase-like KOBITO 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001157977.2 → NP_001151449.2  KOB1

    Status: VALIDATED

    Source sequence(s)
    BT063994, EB704187
    UniProtKB/TrEMBL
    B4FWJ0, B6U0N0, C0PL21
    Related
    Zm00001eb119140_P001, Zm00001eb119140_T001
    Conserved Domains (1) summary
    cl11394
    Location:240 → 384
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050098.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    1846307..1851093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials