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LOC100275478 uncharacterized LOC100275478 [ Zea mays ]

Gene ID: 100275478, updated on 19-Dec-2018

Summary

Gene symbol
LOC100275478
Gene description
uncharacterized LOC100275478
Locus tag
ZEAMMB73_Zm00001d029402
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
umc2227

Genomic context

See LOC100275478 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (69015700..69017860, complement)
100 previous assembly B73 RefGen_v3 (GCF_000005005.1) 1 NC_024459.1 (67856797..67858977, complement)

Chromosome 1 - NC_024459.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109943639 Neighboring gene protein claret segregational-like Neighboring gene uncharacterized LOC109943640 Neighboring gene cyclin-D2-2-like Neighboring gene uncharacterized LOC100174971

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

  • PZA00415_Zea_mays_ssp._parviglumis_Benz_967 (e-PCR)

General protein information

Preferred Names
uncharacterized protein LOC100275478
Names
PCO120585
putative HLH DNA-binding domain superfamily protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001149542.1NP_001143014.1  uncharacterized protein LOC100275478

    See identical proteins and their annotated locations for NP_001143014.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) lacks the first intron.
    Source sequence(s)
    BT066898
    UniProtKB/TrEMBL
    B4FTM7
  2. NM_001348916.1NP_001335845.1  uncharacterized protein LOC100275478

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has the first intron.
    Source sequence(s)
    EU956184, FL453325

RefSeqs of Annotated Genomes: Zea mays Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference B73 RefGen_v4 Primary Assembly

Genomic

  1. NC_024459.2 Reference B73 RefGen_v4 Primary Assembly

    Range
    69015700..69017860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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