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AIRN antisense of IGF2R non-protein coding RNA [ Homo sapiens (human) ]

Gene ID: 100271873, updated on 1-Aug-2020

Summary

Official Symbol
AIRNprovided by HGNC
Official Full Name
antisense of IGF2R non-protein coding RNAprovided by HGNC
Primary source
HGNC:HGNC:34515
See related
Ensembl:ENSG00000268257 MIM:604893
Gene type
ncRNA
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AIR; IGF2RAS; IGF2R-AS; IGF2R-AS1; NCRNA00088
Summary
Both spliced and un-spliced long non-coding RNAs are transcribed from this gene. This gene overlaps on the opposite strand the second intron of the insulin-like growth factor 2 receptor gene; a CpG island associated with the second intron denotes an active promoter that drives the expression of this gene. The related mouse gene is responsible for silencing the insulin-like growth factor 2 receptor gene and flanking genes in the imprinted gene cluster of mice. This gene may be expressed in Wilms tumors. [provided by RefSeq, Feb 2013]
Expression
Low expression observed in reference dataset See more

Genomic context

See AIRN in Genome Data Viewer
Location:
6q25.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (160003291..160007664, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (160424323..160428696, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene PARN like, ribonuclease domain containing 1 Neighboring gene MAS1 proto-oncogene, G protein-coupled receptor Neighboring gene insulin like growth factor 2 receptor Neighboring gene CHP1 pseudogene 2 Neighboring gene solute carrier family 22 member 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_047511.1 RNA Sequence

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) is a spliced transcript and consists of three exons.
    Source sequence(s)
    AL035691
    Related
    ENST00000609176.1
  2. NR_047514.1 RNA Sequence

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) represents a unspliced transcript.
    Source sequence(s)
    AL035691
    Related
    ENST00000601203.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    160003291..160007664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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