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RPL5P16 ribosomal protein L5 pseudogene 16 [ Homo sapiens (human) ]

Gene ID: 100270837, updated on 4-Mar-2025

Summary

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Official Symbol
RPL5P16provided by HGNC
Official Full Name
ribosomal protein L5 pseudogene 16provided by HGNC
Primary source
HGNC:HGNC:36009
See related
Ensembl:ENSG00000240411 AllianceGenome:HGNC:36009
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL5_7_588
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Genomic context

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See RPL5P16 in Genome Data Viewer
Location:
5q14.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (82777797..82778593)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (83263610..83264406)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (82073616..82074412)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901019 Neighboring gene MPRA-validated peak5317 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:81819418-81819955 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:81839635-81840222 Neighboring gene NANOG hESC enhancer GRCh37_chr5:81886910-81887451 Neighboring gene uncharacterized LOC105379050 Neighboring gene uncharacterized LOC124901020 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22737 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22738 Neighboring gene microRNA 3977

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011269.1 

    Range
    101..897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    82777797..82778593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    83263610..83264406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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