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RPL26L1-AS1 RPL26L1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100268168, updated on 13-May-2022

Summary

Official Symbol
RPL26L1-AS1provided by HGNC
Official Full Name
RPL26L1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55914
See related
Ensembl:ENSG00000204758 AllianceGenome:HGNC:55914
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.4), brain (RPKM 0.6) and 15 other tissues See more
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Genomic context

See RPL26L1-AS1 in Genome Data Viewer
Location:
5q35.1
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (172954782..172959368, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (173494828..173499434, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (172381785..172386371, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum-golgi intermediate compartment 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:172331587-172332786 Neighboring gene microRNA 10523 Neighboring gene ribosomal protein L26 like 1 Neighboring gene Sharpr-MPRA regulatory region 5956 Neighboring gene inorganic pyrophosphatase 1 pseudogene Neighboring gene ATPase H+ transporting V0 subunit e1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026682.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC008429, BX100317
  2. NR_026683.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (2) represents use of an alternate promoter, contains a distinct 5' exon, and uses an alternate splice site near the 3' end, compared to variant 1.
    Source sequence(s)
    AI457435, BU078327, CA777768, CA843506
    Related
    ENST00000520067.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    172954782..172959368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    173494828..173499434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)