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TNKS2 tankyrase 2 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100226670, updated on 18-Sep-2024

Summary

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Gene symbol
TNKS2
Gene description
tankyrase 2
See related
Ensembl:ENSTGUG00000008510
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TNKS2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
27
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 6 NC_044218.2 (19441576..19470359)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 6 NC_045005.1 (18688856..18717598)

Chromosome 6 - NC_044218.2Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 3C Neighboring gene uncharacterized LOC115495784 Neighboring gene fibroblast growth factor binding protein 3 Neighboring gene dopamine receptor 1d

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to ciliary inversin compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary inversin compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly [ADP-ribose] polymerase tankyrase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044218.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    19441576..19470359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030276086.3 → XP_030131946.3  poly [ADP-ribose] polymerase tankyrase-2

    UniProtKB/TrEMBL
    H0ZE07
    Conserved Domains (7) summary
    PTZ00322
    Location:29 → 115
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:75 → 439
    PHA02876; ankyrin repeat protein; Provisional
    cd09524
    Location:873 → 938
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    PHA03095
    Location:496 → 804
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:311 → 508
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd01438
    Location:940 → 1162
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    sd00045
    Location:530 → 558
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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