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LRRC8A leucine rich repeat containing 8 VRAC subunit A [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100221444, updated on 15-Feb-2018

Summary

Gene symbol
LRRC8A
Gene description
leucine rich repeat containing 8 VRAC subunit A
See related
Ensembl:ENSTGUG00000004233
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs

Genomic context

See LRRC8A in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Taeniopygia_guttata-3.2.4 (GCF_000151805.1) 17 NC_011481.1 (5844840..5862504)

Chromosome 17 - NC_011481.1Genomic Context describing neighboring genes Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene kynurenine aminotransferase 1 Neighboring gene phytanoyl-CoA dioxygenase domain containing 1 Neighboring gene dolichol kinase

Genomic regions, transcripts, and products

Genomic Sequence:
NC_011481.1 Chromosome 17 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
volume-regulated anion channel subunit LRRC8A
Names
leucine rich repeat containing 8 family member A

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taeniopygia_guttata-3.2.4 Primary Assembly

Genomic

  1. NC_011481.1 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Range
    5844840..5862504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002198186.3XP_002198222.1  volume-regulated anion channel subunit LRRC8A

    See identical proteins and their annotated locations for XP_002198222.1

    UniProtKB/TrEMBL
    H0Z1B2
    Related
    ENSTGUP00000004350
    Conserved Domains (4) summary
    sd00033
    Location:546568
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12534
    Location:1340
    Pannexin_like; Pannexin-like TM region of LRRC8
    pfam12799
    Location:662702
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:662743
    LRR_8; Leucine rich repeat
  2. XM_012578323.1XP_012433777.1  volume-regulated anion channel subunit LRRC8A

    See identical proteins and their annotated locations for XP_012433777.1

    UniProtKB/TrEMBL
    H0Z1B2
    Conserved Domains (4) summary
    sd00033
    Location:546568
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12534
    Location:1340
    Pannexin_like; Pannexin-like TM region of LRRC8
    pfam12799
    Location:662702
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:662743
    LRR_8; Leucine rich repeat
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