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LOC100216848 uncharacterized LOC100216848 [ Zea mays ]

Gene ID: 100216848, updated on 23-Mar-2019

Summary

Gene symbol
LOC100216848
Gene description
uncharacterized LOC100216848
Locus tag
ZEAMMB73_Zm00001d049369
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
ABI14; IDP386; GRMZM2G106673

Genomic context

See LOC100216848 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
102 current B73 RefGen_v4 (GCF_000005005.2) 4 NC_024462.2 (28009276..28016372)
100 previous assembly B73 RefGen_v3 (GCF_000005005.1) 4 NC_024462.1 (26519173..26526260)

Chromosome 4 - NC_024462.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100272473 Neighboring gene uncharacterized LOC103655180 Neighboring gene histone acetyltransferase type B catalytic subunit-like Neighboring gene VIN3-like protein 2 Neighboring gene SKP1-like protein 21

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
uncharacterized LOC100216848; uncharacterized protein LOC100216848
Names
ABI3VP1 transcription factor
B3 domain-containing protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001143240.1NP_001136712.1  uncharacterized LOC100216848

    See identical proteins and their annotated locations for NP_001136712.1

    Status: PROVISIONAL

    Source sequence(s)
    BT037444
    UniProtKB/TrEMBL
    B4FK06
    Conserved Domains (1) summary
    cd10017
    Location:151242
    B3_DNA; Plant-specific B3-DNA binding domain

RefSeqs of Annotated Genomes: Zea mays Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference B73 RefGen_v4 Primary Assembly

Genomic

  1. NC_024462.2 Reference B73 RefGen_v4 Primary Assembly

    Range
    28009276..28016372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008678445.3XP_008676667.1  uncharacterized protein LOC100216848 isoform X1

    See identical proteins and their annotated locations for XP_008676667.1

    UniProtKB/TrEMBL
    B4FK06
    Conserved Domains (1) summary
    cd10017
    Location:151242
    B3_DNA; Plant-specific B3-DNA binding domain
  2. XM_008678446.2XP_008676668.1  uncharacterized protein LOC100216848 isoform X2

    See identical proteins and their annotated locations for XP_008676668.1

    Conserved Domains (1) summary
    cd10017
    Location:132223
    B3_DNA; Plant-specific B3-DNA binding domain
  3. XM_020551324.2XP_020406913.1  uncharacterized protein LOC100216848 isoform X2

    Conserved Domains (1) summary
    cd10017
    Location:132223
    B3_DNA; Plant-specific B3-DNA binding domain
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