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LINC01004 long intergenic non-protein coding RNA 1004 [ Homo sapiens (human) ]

Gene ID: 100216546, updated on 12-Jun-2022

Summary

Official Symbol
LINC01004provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1004provided by HGNC
Primary source
HGNC:HGNC:48961
See related
AllianceGenome:HGNC:48961
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LINC01004 in Genome Data Viewer
Location:
7q22.3
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (104981747..104991165, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (106296452..106305868, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (104622194..104631612, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene LHFPL3 antisense RNA 2 Neighboring gene uncharacterized LOC101927902 Neighboring gene Sharpr-MPRA regulatory region 8680 Neighboring gene RNA, 7SL, cytoplasmic 8, pseudogene Neighboring gene KMT2E antisense RNA 1 Neighboring gene lysine methyltransferase 2E (inactive) Neighboring gene SRSF protein kinase 2

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • FLJ35127, FLJ41601, FLJ44142

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039981.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007384

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    104981747..104991165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    106296452..106305868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)