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LOC100210000 cyclin-dependent kinase 13 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100210000, updated on 30-Nov-2023

Summary

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Gene symbol
LOC100210000
Gene description
cyclin-dependent kinase 13
See related
EnsemblRapid:LOC100210000
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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See LOC100210000 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Hydra_105_v3 (GCF_022113875.1) 7 NC_061162.1 (7292461..7313323, complement)
102 previous assembly Hydra_RP_1.0 (GCF_000004095.1) Unplaced Scaffold NW_004169104.1 (70129..91172)

Chromosome 7 - NC_061162.1Genomic Context describing neighboring genes Neighboring gene nucleolar MIF4G domain-containing protein 1-like Neighboring gene uncharacterized LOC124813252 Neighboring gene uncharacterized LOC100205256 Neighboring gene uncharacterized LOC124813253 Neighboring gene uncharacterized LOC101240934

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hydra vulgaris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hydra_105_v3 Primary Assembly

Genomic

  1. NC_061162.1 Reference Hydra_105_v3 Primary Assembly

    Range
    7292461..7313323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002163163.4 → XP_002163199.2  cyclin-dependent kinase 13

    UniProtKB/TrEMBL
    T2MCZ7
    Related
    XP_002163199.2, XM_002163163.4
    Conserved Domains (1) summary
    cl21453
    Location:426 → 728
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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