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LOC100198755 nucleosome assembly protein 1-like 1 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100198755, updated on 30-Nov-2023

Summary

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Gene symbol
LOC100198755
Gene description
nucleosome assembly protein 1-like 1
See related
EnsemblRapid:LOC100198755
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Genomic context

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Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Hydra_105_v3 (GCF_022113875.1) 6 NC_061161.1 (58626286..58636654, complement)
102 previous assembly Hydra_RP_1.0 (GCF_000004095.1) Unplaced Scaffold NW_004167495.1 (47015..57133, complement)

Chromosome 6 - NC_061161.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124812782 Neighboring gene band 7 protein AGAP004871-like Neighboring gene uncharacterized LOC105848729 Neighboring gene uncharacterized LOC124812783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Profiling of adhesive-related genes in the freshwater cnidarian Hydra magnipapillata by transcriptomics and proteomics. Rodrigues M, et al. Biofouling, 2016 Oct. PMID 27661452, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleosome assembly protein 1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hydra vulgaris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hydra_105_v3 Primary Assembly

Genomic

  1. NC_061161.1 Reference Hydra_105_v3 Primary Assembly

    Range
    58626286..58636654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002156757.4 → XP_002156793.1  nucleosome assembly protein 1-like 1

    UniProtKB/TrEMBL
    T2MFG3
    Related
    XP_002156793.1, XM_002156757.4
    Conserved Domains (1) summary
    pfam00956
    Location:52 → 334
    NAP; Nucleosome assembly protein (NAP)
Nucleotide Protein
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