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LOC100198653 X-box-binding protein 1 [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100198653, updated on 10-Feb-2026
Gene symbol
LOC100198653
Gene description
X-box-binding protein 1
See related
EnsemblRapid:LOC100198653
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
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Try the new Transcripts and proteins table
See LOC100198653 in Genome Data Viewer
Location:
chromosome: 09
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 09 NC_088972.1 (47001168..47005763, complement)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 09 NC_088928.1 (51406966..51414263, complement)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 5 NC_061160.1 (47235081..47239637, complement)

Chromosome 09 - NC_088972.1Genomic Context describing neighboring genes Neighboring gene AP-5 complex subunit mu-1 Neighboring gene ADP-ribosylhydrolase ARH3 Neighboring gene uncharacterized LOC124810930 Neighboring gene zinc finger MYM-type protein 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
X-box-binding protein 1; uncharacterized protein LOC100198653

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088972.1 Reference HydraT2T_105 Primary Assembly

    Range
    47001168..47005763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002162672.5 → XP_002162708.1  X-box-binding protein 1

    UniProtKB/TrEMBL
    T2MHA5
    Related
    XP_002162708.1
    Conserved Domains (1) summary
    cd14691
    Location:50 → 101
    bZIP_XBP1; Basic leucine zipper (bZIP) domain of X-box binding protein 1 (XBP1) and similar proteins: a DNA-binding and dimerization domain

Alternate HydraT2T_AEP

Genomic

  1. NC_088928.1 Alternate HydraT2T_AEP

    Range
    51406966..51414263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065806009.1 → XP_065662081.1  uncharacterized protein LOC100198653

    UniProtKB/TrEMBL
    A0ABM4CJZ7
Nucleotide Protein
Heading Accession and Version

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