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LOC100197448 protein CLP1 homolog [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100197448, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100197448
Gene description
protein CLP1 homolog
See related
EnsemblRapid:LOC100197448
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
Also known as
CLP1
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Hydra_105_v3 (GCF_022113875.1) 7 NC_061162.1 (31952700..31964183)
102 previous assembly Hydra_RP_1.0 (GCF_000004095.1) Unplaced Scaffold NW_004169126.1 (54247..64992)

Chromosome 7 - NC_061162.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101239505 Neighboring gene uncharacterized LOC124813992 Neighboring gene uncharacterized LOC100200997 Neighboring gene F-box/LRR-repeat protein 20-like Neighboring gene tricarboxylate transport protein B, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Punctuated emergences of genetic and phenotypic innovations in eumetazoan, bilaterian, euteleostome, and hominidae ancestors. Wenger Y, et al. Genome Biol Evol, 2013. PMID 24065732, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polynucleotide 5'-hydroxyl-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLP1 homolog
Names
Hydra vulgaris Polyribonucleotide 5'-hydroxyl-kinase Clp1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hydra vulgaris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hydra_105_v3 Primary Assembly

Genomic

  1. NC_061162.1 Reference Hydra_105_v3 Primary Assembly

    Range
    31952700..31964183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012703709.2 → XP_012559163.2  protein CLP1 homolog

    Related
    XP_012559163.2, XM_012703709.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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