U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

acyp2 Acylphosphatase-2 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100196119, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
acyp2
Gene description
Acylphosphatase-2
See related
Ensembl:ENSSSAG00000049862
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See acyp2 in Genome Data Viewer
Location:
chromosome: ssa12
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa12 NC_059453.1 (38515204..38524223, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa12 NC_027311.1 (31321420..31330470)

Chromosome ssa12 - NC_059453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C2orf73 Neighboring gene uncharacterized LOC106565003 Neighboring gene 3-hydroxybutyrate dehydrogenase, type 2 Neighboring gene cilia and flagella associated protein 58

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acylphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acylphosphatase 2
NP_001134620.1
XP_013987031.1
XP_045546392.1
XP_045546393.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001141148.1 → NP_001134620.1  acylphosphatase 2 precursor

    See identical proteins and their annotated locations for NP_001134620.1

    Status: PROVISIONAL

    Source sequence(s)
    BT048431
    UniProtKB/TrEMBL
    B5XBL2
    Related
    ENSSSAP00000049884.1, ENSSSAT00000077836.2
    Conserved Domains (1) summary
    pfam00708
    Location:35 → 120
    Acylphosphatase

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059453.1 Reference Ssal_v3.1

    Range
    38515204..38524223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045690436.1 → XP_045546392.1  acylphosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1S3L7S7
    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase

  2. XM_014131556.2 → XP_013987031.1  acylphosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1S3L7S7
    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase

  3. XM_045690437.1 → XP_045546393.1  acylphosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1S3L7S7
    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.