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hoxc5ab homeobox protein HoxC5ab [ Salmo salar (Atlantic salmon) ]

Gene ID: 100194444, updated on 12-Mar-2017

Summary

Gene symbol
hoxc5ab
Gene description
homeobox protein HoxC5ab
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo

Genomic context

See hoxc5ab in Genome Data Viewer
Location:
chromosome: ssa15
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ICSASG_v2 (GCF_000233375.1) ssa15 NC_027314.1 (88480323..88482099, complement)

Chromosome ssa15 - NC_027314.1Genomic Context describing neighboring genes Neighboring gene homeobox protein HoxC10ab Neighboring gene homeobox protein HoxC4ab Neighboring gene uncharacterized LOC106572581 Neighboring gene homeobox protein HoxC6ab Neighboring gene homeobox protein HoxC8an

Genomic regions, transcripts, and products

Genomic Sequence:
NC_027314.1 Chromosome ssa15 Reference ICSASG_v2 Primary Assembly

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001139536.1NP_001133008.1  homeobox protein HoxC5ab

    See identical proteins and their annotated locations for NP_001133008.1

    Status: PROVISIONAL

    Source sequence(s)
    EF695264
    UniProtKB/TrEMBL
    B3SU83
    Conserved Domains (1) summary
    pfam00046
    Location:170220
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ICSASG_v2 Primary Assembly

Genomic

  1. NC_027314.1 Reference ICSASG_v2 Primary Assembly

    Range
    88480323..88482099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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