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Atxn7l3b ataxin 7-like 3B [ Rattus norvegicus (Norway rat) ]

Gene ID: 100192313, updated on 13-Aug-2019

Summary

Symbol
Atxn7l3bprovided by RGD
Full Name
ataxin 7-like 3Bprovided by RGD
Primary source
RGD:2301984
See related
Ensembl:ENSRNOG00000059744
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Orthologs

Genomic context

See Atxn7l3b in Genome Data Viewer
Location:
7q22
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (55600879..55604403, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 7 NC_005106.3 (55621384..55624908, complement)

Chromosome 7 - NC_005106.4Genomic Context describing neighboring genes Neighboring gene ribosomal protein L27a-like Neighboring gene potassium voltage-gated channel subfamily C member 2 Neighboring gene uncharacterized LOC103692854 Neighboring gene uncharacterized LOC108351452 Neighboring gene uncharacterized LOC108351451

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of gene expression ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
putative ataxin-7-like protein 3B

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136261.1NP_001129733.1  putative ataxin-7-like protein 3B

    Status: VALIDATED

    Source sequence(s)
    AABR07057105
    UniProtKB/TrEMBL
    D3ZFQ1
    Related
    ENSRNOP00000073435.1, ENSRNOT00000088732.1

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005106.4 Reference Rnor_6.0 Primary Assembly

    Range
    55600879..55604403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000075.1 Alternate Rn_Celera

    Range
    45121840..45125364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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