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LOC100191591 uncharacterized LOC100191591 [ Zea mays ]

Gene ID: 100191591, updated on 27-Nov-2024

Summary

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Gene symbol
LOC100191591
Gene description
uncharacterized LOC100191591
Locus tag
ZEAMMB73_Zm00001d050716
See related
EnsemblRapid:Zm00001eb181880
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
gpm301; GRMZM2G170842
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Genomic context

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See LOC100191591 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 4 NC_050099.1 (119430136..119435065, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 4 NC_024462.2 (118326022..118330950, complement)

Chromosome 4 - NC_050099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103653616 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC100279916 Neighboring gene B3 domain-containing protein Os07g0679700-like Neighboring gene putative snRK/SAPK family protein kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
  2. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
  3. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  4. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

  • PZA00092_Zea_mays_ssp._parviglumis_Beadle_&_Kato_site_4 (e-PCR)

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endo-alpha-N-acetylgalactosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sucrose alpha-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Cytosolic invertase 1-like
Names
Alkaline/neutral invertase CINV2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001137021.1 → NP_001130493.1  Cytosolic invertase 1-like

    See identical proteins and their annotated locations for NP_001130493.1

    Status: PROVISIONAL

    Source sequence(s)
    BT033722
    UniProtKB/TrEMBL
    A0A3L6ELC7, B4F9D4
    Related
    Zm00001eb181880_P001, Zm00001eb181880_T001
    Conserved Domains (1) summary
    cl17340
    Location:6 → 558
    Glyco_hydro_100; Alkaline and neutral invertase

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050099.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    119430136..119435065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials