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BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100190807, updated on 26-Mar-2024

Summary

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Gene symbol
BLOC1S1
Gene description
biogenesis of lysosomal organelles complex 1 subunit 1
Locus tag
CR201_G0027866
See related
Ensembl:ENSPPYG00000004627
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (53613856..53617520)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (53614726..53618390)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta type-3-like Neighboring gene thiol methyltransferase 1B Neighboring gene integrin subunit alpha 7 Neighboring gene retinol dehydrogenase 5 Neighboring gene uncharacterized LOC100440135 Neighboring gene CD63 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BLOC-1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biogenesis of lysosome-related organelles complex 1 subunit 1
Names
BLOC-1 subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135495.2 → NP_001128967.2  biogenesis of lysosome-related organelles complex 1 subunit 1

    See identical proteins and their annotated locations for NP_001128967.2

    Status: VALIDATED

    Source sequence(s)
    CR860096
    UniProtKB/Swiss-Prot
    Q5R7L8
    Related
    ENSPPYP00000005273.2, ENSPPYT00000005480.3
    Conserved Domains (1) summary
    pfam06320
    Location:33 → 145
    GCN5L1; GCN5-like protein 1 (GCN5L1)

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    53613856..53617520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R7L8.2 GenPept UniProtKB/Swiss-Prot:Q5R7L8

Gene LinkOut

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