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RPS3A ribosomal protein S3A [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100190288, updated on 8-Mar-2024

Summary

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Gene symbol
RPS3A
Gene description
ribosomal protein S3A
See related
Ensembl:ENSTGUG00000029174
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 4 NC_044215.2 (43378235..43381767, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 4 NC_045002.1 (43449832..43453350, complement)

Chromosome 4 - NC_044215.2Genomic Context describing neighboring genes Neighboring gene FHF complex subunit HOOK interacting protein 1A Neighboring gene SH3 domain containing 19 Neighboring gene uncharacterized LOC121469898 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene ribonuclease CL2-like Neighboring gene PEAK1 related, kinase-activating pseudokinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Songbird Neurogenomics (SoNG) Initiative: community-based tools and strategies for study of brain gene function and evolution. Replogle K, et al. BMC Genomics, 2008 Mar 18. PMID 18366674, Free PMC Article
  2. A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes. Wada K, et al. Proc Natl Acad Sci U S A, 2006 Oct 10. PMID 17018643, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S3a
NP_001185510.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198581.1 → NP_001185510.1  40S ribosomal protein S3a

    See identical proteins and their annotated locations for NP_001185510.1

    Status: VALIDATED

    Source sequence(s)
    DQ214670, DQ214672, DQ214673, FE716532, RRCB02000019
    UniProtKB/Swiss-Prot
    B5FZS9
    UniProtKB/TrEMBL
    A0A674H1D3
    Related
    ENSTGUP00000030042.1, ENSTGUT00000037298.1
    Conserved Domains (1) summary
    pfam01015
    Location:21 → 221
    Ribosomal_S3Ae; Ribosomal S3Ae family

RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044215.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    43378235..43381767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B5FZS9.1 GenPept UniProtKB/Swiss-Prot:B5FZS9

Gene LinkOut

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