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TRC-GCA2-2 tRNA-Cys (anticodon GCA) 2-2 [ Homo sapiens (human) ]

Gene ID: 100189052, updated on 10-Oct-2023

Summary

Official Symbol
TRC-GCA2-2provided by HGNC
Official Full Name
tRNA-Cys (anticodon GCA) 2-2provided by HGNC
Primary source
HGNC:HGNC:34611
See related
AllianceGenome:HGNC:34611
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAC5; TRC-GCA2-1
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Genomic context

See TRC-GCA2-2 in Genome Data Viewer
Location:
17q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (38867645..38867716)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (39730695..39730766)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (37023898..37023969)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein S20 pseudogene 35 Neighboring gene tRNA-Cys (anticodon GCA) 14-1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12081 Neighboring gene CRISPRi-validated cis-regulatory element chr17.2188 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37024565-37025165 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8443 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12083 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8444 Neighboring gene tRNA-Cys (anticodon GCA) 4-1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:37027573-37028174 Neighboring gene LIM and SH3 protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8445 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37036179-37036761 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37037929-37038511 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8446 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:37049153-37049726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:37051813-37052334 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37052335-37052856 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37052857-37053378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12084 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:37054945-37055466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:37055467-37055986 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37057617-37058242 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:37068165-37069124 Neighboring gene microRNA 6779

Genomic regions, transcripts, and products

General gene information

Other Names

  • tRNA-Cys (GCA) 2-2
  • tRNA-Cys-GCA-2-1
  • transfer RNA cysteine 5 (anticodon GCA)
  • transfer RNA-Cys (GCA) 2-1
  • transfer RNA-Cys (GCA) 2-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    38867645..38867716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    39730695..39730766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)