SEC11C SEC11 homolog C, signal peptidase complex subunit [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: SEC11C
Gene description: SEC11 homolog C, signal peptidase complex subunit
Locus tag: CR201_G0013459
See related: Ensembl:ENSPPYG00000009189
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as: SEC11L3
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	17	NC_072002.2 (73995314..74014207)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	18	NC_072003.1 (54248162..54267052)

Chromosome 17 - NC_072002.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables serine-type endopeptidase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in signal peptide processing	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of signal peptidase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: signal peptidase complex catalytic subunit SEC11C

Names: SEC11-like protein 3; SPC21; SPase 21 kDa subunit; microsomal signal peptidase 21 kDa subunit

NP_001127320.1

EC 3.4.21.89

XP_009250695.1

EC 3.4.21.89

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001133848.2 → NP_001127320.1 signal peptidase complex catalytic subunit SEC11C

See identical proteins and their annotated locations for NP_001127320.1

Status: PROVISIONAL

Source sequence(s)

CR858452

UniProtKB/Swiss-Prot

Q5RC30

UniProtKB/TrEMBL

A0A2J8W3A2, A0A2J8W3A4

Related

ENSPPYP00000010320.2, ENSPPYT00000010728.3

Conserved Domains (1) summary

cl10465
Location:34 → 167

Peptidase_S24_S26; The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase families. The S24 LexA protein domains include: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the ...

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_072002.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

73995314..74014207

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009252420.4 → XP_009250695.1 signal peptidase complex catalytic subunit SEC11C isoform X1

See identical proteins and their annotated locations for XP_009250695.1

Conserved Domains (1) summary

cl10465
Location:12 → 129

Peptidase_S24_S26; The S24, S26 LexA/signal peptidase superfamily contains LexA-related and type I signal peptidase families. The S24 LexA protein domains include: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the ...