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ADH6 alcohol dehydrogenase 6 (class V) [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173203, updated on 11-Apr-2024

Summary

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Gene symbol
ADH6
Gene description
alcohol dehydrogenase 6 (class V)
Locus tag
CR201_G0033010
See related
Ensembl:ENSPPYG00000014948
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 3 NC_071988.2 (120670909..120687682, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 4 NC_071989.1 (120708178..120724951, complement)

Chromosome 3 - NC_071988.2Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 4 (class II), pi polypeptide Neighboring gene proliferating cell nuclear antigen-like Neighboring gene uncharacterized LOC129059038 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene alcohol dehydrogenase 1A (class I), alpha polypeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp469N0120

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alcohol dehydrogenase (NAD+) activity, zinc-dependent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables all-trans-retinol dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retinoic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alcohol dehydrogenase 6
NP_001126233.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132761.2 → NP_001126233.1  alcohol dehydrogenase 6

    See identical proteins and their annotated locations for NP_001126233.1

    Status: PROVISIONAL

    Source sequence(s)
    CR859958
    UniProtKB/Swiss-Prot
    Q5R7Z8
    UniProtKB/TrEMBL
    A0A2J8TQK4, H2PDY4
    Related
    ENSPPYP00000016690.2, ENSPPYT00000017369.2
    Conserved Domains (2) summary
    cd08299
    Location:3 → 375
    alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases
    COG1062
    Location:8 → 373
    FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071988.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    120670909..120687682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R7Z8.1 GenPept UniProtKB/Swiss-Prot:Q5R7Z8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous