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ILF2 interleukin enhancer binding factor 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100172468, updated on 26-Mar-2024

Summary

Gene symbol
ILF2
Gene description
interleukin enhancer binding factor 2
Locus tag
CR201_G0019039
See related
Ensembl:ENSPPYG00000000800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See ILF2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (96907890..96916962)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (96903470..96912546)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene natriuretic peptide receptor 1 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene SNAP associated protein Neighboring gene chromatin target of PRMT1 Neighboring gene S100 calcium binding protein A13

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp469J1839

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
interleukin enhancer-binding factor 2
Names
interleukin enhancer binding factor 2, 45kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132083.1NP_001125555.1  interleukin enhancer-binding factor 2

    See identical proteins and their annotated locations for NP_001125555.1

    Status: PROVISIONAL

    Source sequence(s)
    CR858754
    UniProtKB/TrEMBL
    A0A2J8VFN5, A0A8I5TX47
    Related
    ENSPPYP00000044387.1, ENSPPYT00000037925.1
    Conserved Domains (1) summary
    smart00572
    Location:60300
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    96907890..96916962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009243848.4XP_009242123.1  interleukin enhancer-binding factor 2 isoform X1

    See identical proteins and their annotated locations for XP_009242123.1

    UniProtKB/Swiss-Prot
    Q5RB97, Q5RFJ1
    UniProtKB/TrEMBL
    A0A2J8VFP5, A0A8I5TX47
    Related
    ENSPPYP00000000934.2
    Conserved Domains (1) summary
    smart00572
    Location:98338
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins