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C11H2orf76 chromosome 11 C2orf76 homolog [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100172350, updated on 3-Apr-2024

Summary

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Gene symbol
C11H2orf76
Gene description
chromosome 11 C2orf76 homolog
Locus tag
CR201_G0018018
See related
Ensembl:ENSPPYG00000012789
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
C2orf76; C2BH2orf76
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 11 NC_071996.2 (28788207..28877510)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 2B NC_071987.1 (26140275..26344213)

Chromosome 11 - NC_071996.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 37 Neighboring gene diazepam binding inhibitor, acyl-CoA binding protein Neighboring gene STEAP3 metalloreductase Neighboring gene complement C1q like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp469L0633

General protein information

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Preferred Names
UPF0538 protein C2orf76 homolog
Names
chromosome 2B C2orf76 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131970.2 → NP_001125442.1  UPF0538 protein C2orf76 homolog

    See identical proteins and their annotated locations for NP_001125442.1

    Status: PROVISIONAL

    Source sequence(s)
    CR858556
    UniProtKB/Swiss-Prot
    Q5RBS7
    UniProtKB/TrEMBL
    A0A0A0MXQ8, A0A2J8VMB7
    Related
    ENSPPYP00000014271.2, ENSPPYT00000014852.2
    Conserved Domains (1) summary
    pfam10209
    Location:8 → 122
    DUF2340; Uncharacterized conserved protein (DUF2340)

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071996.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    28788207..28877510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054548600.2 → XP_054404575.1  UPF0538 protein C2orf76 homolog isoform X1

  2. XM_054548601.2 → XP_054404576.1  UPF0538 protein C2orf76 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2J8VMA5

  3. XM_009237644.3 → XP_009235919.1  UPF0538 protein C2orf76 homolog isoform X3

    See identical proteins and their annotated locations for XP_009235919.1

    UniProtKB/Swiss-Prot
    Q5RBS7
    UniProtKB/TrEMBL
    A0A0A0MXQ8, A0A2J8VMB7
    Conserved Domains (1) summary
    pfam10209
    Location:8 → 122
    DUF2340; Uncharacterized conserved protein (DUF2340)

  4. XM_063712439.1 → XP_063568509.1  UPF0538 protein C2orf76 homolog isoform X1

  5. XM_063712440.1 → XP_063568510.1  UPF0538 protein C2orf76 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2J8VMA5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5RBS7.1 GenPept UniProtKB/Swiss-Prot:Q5RBS7

Gene LinkOut

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