Format

Send to:

Choose Destination

ZSCAN2 zinc finger and SCAN domain containing 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100172202, updated on 5-Mar-2018
Gene symbol
ZSCAN2
Gene description
zinc finger and SCAN domain containing 2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
ZFP29; Zfp-29
Orthologs
See ZSCAN2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Susie_PABv2 (GCF_002880775.1) 15 NC_036918.1 (65405848..65428302, complement)
102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 15 Unlocalized Scaffold NW_002958673.1 (72082..95181)

Chromosome 15 - NC_036918.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 73 Neighboring gene putative SCAN domain-containing protein SCAND2P Neighboring gene uncharacterized LOC100938654 Neighboring gene uncharacterized LOC112129038

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Clone Names

  • DKFZp469D0914
Preferred Names
zinc finger and SCAN domain-containing protein 2
Names
Zinc finger protein 29 homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131831.1NP_001125303.1  zinc finger and SCAN domain-containing protein 2

    See identical proteins and their annotated locations for NP_001125303.1

    Status: PROVISIONAL

    Source sequence(s)
    CR858332
    UniProtKB/Swiss-Prot
    Q5RCD9
    Conserved Domains (5) summary
    COG5048
    Location:251631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:395415
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:253275
    zf-C2H2; Zinc finger, C2H2 type
    pfam02023
    Location:72134
    SCAN; SCAN domain
    pfam13465
    Location:519544
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Susie_PABv2 Primary Assembly

Genomic

  1. NC_036918.1 Reference Susie_PABv2 Primary Assembly

    Range
    65405848..65428302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009236313.2XP_009234588.1  zinc finger and SCAN domain-containing protein 2 isoform X1

    See identical proteins and their annotated locations for XP_009234588.1

    UniProtKB/TrEMBL
    K7ETE3
    Conserved Domains (3) summary
    COG5048
    Location:220600
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:364384
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:72134
    SCAN; SCAN domain
Support Center