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BBI-2 Bowman-Birk type proteinase inhibitor [ Glycine max (soybean) ]

Gene ID: 100170689, updated on 7-Dec-2023

Summary

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Gene symbol
BBI-2
Gene description
Bowman-Birk type proteinase inhibitor
Locus tag
GLYMA_18G231400v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
GmBBI-2
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Genomic context

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Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (52288705..52289232, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (52007699..52008226, complement)

Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106797059 Neighboring gene AT-hook motif nuclear-localized protein 9 Neighboring gene putative Bowman-Birk type protease inhibitor Neighboring gene Bowman-Birk type proteinase inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. In silico characterization and expression analysis of the multigene family encoding the Bowman-Birk protease inhibitor in soybean. de Almeida Barros B, et al. Mol Biol Rep, 2012 Jan. PMID 21556767
  2. Protease inhibitor expression in soybean roots exhibiting susceptible and resistant interactions with soybean cyst nematode. Rashed NA, et al. J Nematol, 2008 Jun. PMID 19259530, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bowman-Birk type proteinase inhibitor
Names
putative serine protease inhibitor
serine protease inhibitor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250807.3 → NP_001237736.1  Bowman-Birk type proteinase inhibitor precursor

    See identical proteins and their annotated locations for NP_001237736.1

    Status: VALIDATED

    Source sequence(s)
    ACUP04006566, BQ453659
    UniProtKB/TrEMBL
    B1ACD1
    Conserved Domains (1) summary
    smart00269
    Location:56 → 110
    BowB; Bowman-Birk type proteinase inhibitor

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    52288705..52289232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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