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PABPN1 poly(A) binding protein nuclear 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100170671, updated on 27-Jun-2026
Official Symbol
PABPN1provided by VGNC
Official Full Name
poly(A) binding protein nuclear 1provided by VGNC
Primary source
VGNC:VGNC:50550
See related
Ensembl:ENSCAFG00845003335 RGD:12275832
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See PABPN1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (3688267..3693400)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (3529716..3533880)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (3704030..3708196)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (3380770..3384934)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (3442080..3446241)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 3E Neighboring gene BCL2 like 2 Neighboring gene uncharacterized LOC111096965 Neighboring gene solute carrier family 22 member 17 Neighboring gene embryonal Fyn-associated substrate

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
polyadenylate-binding protein 2

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130437.2 → NP_001123909.2  polyadenylate-binding protein 2

    See identical proteins and their annotated locations for NP_001123909.2

    Status: VALIDATED

    Source sequence(s)
    DN400224, JAAUVH010000053
    UniProtKB/TrEMBL
    A0A8C0JYW0, A0A8I3MVB8
    Related
    ENSCAFP00845004961.1, ENSCAFT00845006243.1
    Conserved Domains (2) summary
    COG0724
    Location:113 → 289
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12550
    Location:173 → 248
    RRM_II_PABPN1; RNA recognition motif in type II polyadenylate-binding protein 2 (PABP-2) and similar proteins

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    3688267..3693400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672828.1 → XP_038528756.1  polyadenylate-binding protein 2 isoform X1

    Conserved Domains (2) summary
    COG0724
    Location:17 → 237
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12550
    Location:121 → 196
    RRM_II_PABPN1; RNA recognition motif in type II polyadenylate-binding protein 2 (PABP-2) and similar proteins

  2. XM_038672829.1 → XP_038528757.1  polyadenylate-binding protein 2 isoform X2

    Conserved Domains (1) summary
    cd12550
    Location:45 → 120
    RRM_II_PABPN1; RNA recognition motif in type II polyadenylate-binding protein 2 (PABP-2) and similar proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    3380770..3384934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    3442080..3446241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    3704030..3708196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    3529716..3533880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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