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Scsalpha succinyl coenzyme A synthetase alpha subunit [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100168943, updated on 7-Dec-2023

Summary

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Gene symbol
Scsalpha
Gene description
succinyl coenzyme A synthetase alpha subunit
See related
APHIDBASE:ACYPI009606; EnsemblRapid:GeneID_100168943
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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Location:
chromosome: A1
Exon count:
6
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (14312975..14316500)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383894.1 (290242..293767)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein 11 Neighboring gene poly [ADP-ribose] polymerase tankyrase Neighboring gene 26S proteasome non-ATPase regulatory subunit 1 Neighboring gene T-complex protein 1 subunit gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex (ADP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl coenzyme A synthetase alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163099.1 → NP_001156571.1  succinyl coenzyme A synthetase alpha subunit

    See identical proteins and their annotated locations for NP_001156571.1

    Status: VALIDATED

    Source sequence(s)
    AK342554, CN586388, EX632419, EX637424
    UniProtKB/TrEMBL
    C4WXC2, J9K9I8
    Related
    NP_001156571.1, NM_001163099.1
    Conserved Domains (3) summary
    PTZ00187
    Location:19 → 330
    PTZ00187; succinyl-CoA synthetase alpha subunit; Provisional
    pfam02629
    Location:41 → 134
    CoA_binding; CoA binding domain
    cl22543
    Location:187 → 312
    Ligase_CoA; CoA-ligase

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    14312975..14316500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases