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LOC100165448 histone-lysine N-methyltransferase ASH1L [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100165448, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100165448
Gene description
histone-lysine N-methyltransferase ASH1L
See related
APHIDBASE:ACYPI006399; EnsemblRapid:LOC100165448
Gene type
protein coding
RefSeq status
MODEL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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Genomic context

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Location:
chromosome: A1
Exon count:
4
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (141256060..141266774, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383721.1 (485251..495516, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene chromatin modifying protein 1-like Neighboring gene endoplasmic reticulum metallopeptidase 1-like Neighboring gene UPF0446 protein C12orf31 homolog-like Neighboring gene fasciculation and elongation protein zeta-2 Neighboring gene arylalkylamine N-acetyltransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase ASH1L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    141256060..141266774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016803736.2 → XP_016659225.1  histone-lysine N-methyltransferase ASH1L

    UniProtKB/TrEMBL
    A0A8R2JQ55
    Related
    XP_016659225.1, XM_016803736.2
    Conserved Domains (5) summary
    cd04717
    Location:1263 → 1399
    BAH_polybromo; BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional ...
    cd15548
    Location:1188 → 1231
    PHD_ASH1L; PHD finger found in histone-lysine N-methyltransferase ASH1L
    pfam17907
    Location:743 → 776
    AWS; AWS domain
    cd19174
    Location:782 → 922
    SET_ASH1L; SET domain (including post-SET domain) found in ASH1-like protein (ASH1L) and similar proteins
    cl02556
    Location:1050 → 1155
    Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.

  2. XM_029488468.1 → XP_029344328.1  histone-lysine N-methyltransferase ASH1L

    UniProtKB/TrEMBL
    A0A8R2JQ55
    Related
    XP_029344328.1, XM_029488468.1
    Conserved Domains (5) summary
    cd04717
    Location:1263 → 1399
    BAH_polybromo; BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional ...
    cd15548
    Location:1188 → 1231
    PHD_ASH1L; PHD finger found in histone-lysine N-methyltransferase ASH1L
    pfam17907
    Location:743 → 776
    AWS; AWS domain
    cd19174
    Location:782 → 922
    SET_ASH1L; SET domain (including post-SET domain) found in ASH1-like protein (ASH1L) and similar proteins
    cl02556
    Location:1050 → 1155
    Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.

  3. XM_008184016.3 → XP_008182238.1  histone-lysine N-methyltransferase ASH1L

    UniProtKB/TrEMBL
    A0A8R2JQ55
    Related
    XP_008182238.1, XM_008184016.3
    Conserved Domains (5) summary
    cd04717
    Location:1263 → 1399
    BAH_polybromo; BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional ...
    cd15548
    Location:1188 → 1231
    PHD_ASH1L; PHD finger found in histone-lysine N-methyltransferase ASH1L
    pfam17907
    Location:743 → 776
    AWS; AWS domain
    cd19174
    Location:782 → 922
    SET_ASH1L; SET domain (including post-SET domain) found in ASH1-like protein (ASH1L) and similar proteins
    cl02556
    Location:1050 → 1155
    Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Nucleotide Protein
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