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NFS1 NFS1, cysteine desulfurase [ Sus scrofa (pig) ]

Gene ID: 100156145, updated on 2-Oct-2018

Summary

Gene symbol
NFS1
Gene description
NFS1, cysteine desulfurase
See related
Ensembl:ENSSSCG00000007307
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 35.3), liver (RPKM 20.5) and 8 other tissues See more
Orthologs

Genomic context

See NFS1 in Genome Data Viewer
Location:
17; 17
Exon count:
13
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 17 NC_010459.5 (39000659..39029179, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 17 NC_010459.4 (44351262..44379781, complement)

Chromosome 17 - NC_010459.5Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 4 Neighboring gene copine 1 Neighboring gene RNA binding motif protein 12 Neighboring gene reactive oxygen species modulator 1 Neighboring gene RNA binding motif protein 39

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Pathways from BioSystems

General protein information

Preferred Names
cysteine desulfurase, mitochondrial
Names
nitrogen fixation 1-like protein
NP_001129982.1
XP_005672944.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136510.1NP_001129982.1  cysteine desulfurase, mitochondrial

    See identical proteins and their annotated locations for NP_001129982.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ211193
    UniProtKB/TrEMBL
    B6UV57
    Related
    ENSSSCP00000052905.1, ENSSSCT00000052084.1
    Conserved Domains (2) summary
    PRK14012
    Location:58457
    PRK14012; cysteine desulfurase; Provisional
    pfam00266
    Location:60421
    Aminotran_5; Aminotransferase class-V

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010459.5 Reference Sscrofa11.1 Primary Assembly

    Range
    39000659..39029179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005672887.2XP_005672944.1  cysteine desulfurase, mitochondrial isoform X1

    Conserved Domains (2) summary
    PLN02651
    Location:59359
    PLN02651; cysteine desulfurase
    pfam00266
    Location:60349
    Aminotran_5; Aminotransferase class-V
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