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ELOVL3 ELOVL fatty acid elongase 3 [ Sus scrofa (pig) ]

Gene ID: 100155434, updated on 8-Mar-2024

Summary

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Official Symbol
ELOVL3provided by VGNC
Official Full Name
ELOVL fatty acid elongase 3provided by VGNC
Primary source
VGNC:VGNC:87659
See related
Ensembl:ENSSSCG00000010577
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 14 NC_010456.5 (113226589..113230038)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 14 NC_010456.4 (123080520..123083970)

Chromosome 14 - NC_010456.5Genomic Context describing neighboring genes Neighboring gene PPARG related coactivator 1 Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene paired like homeodomain 3 Neighboring gene golgi brefeldin A resistant guanine nucleotide exchange factor 1 Neighboring gene uncharacterized LOC106506113

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very long chain fatty acid elongase 3; elongation of very long chain fatty acids protein 3
Names
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
NP_001161106.1
XP_005671455.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167634.1 → NP_001161106.1  very long chain fatty acid elongase 3

    See identical proteins and their annotated locations for NP_001161106.1

    Status: PROVISIONAL

    Source sequence(s)
    AB529460
    UniProtKB/TrEMBL
    A0A4X1TWB9, A0A8D1TU71, D0G6S7
    Related
    ENSSSCP00000011268.2, ENSSSCT00000011570.4
    Conserved Domains (1) summary
    pfam01151
    Location:29 → 266
    ELO; GNS1/SUR4 family

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010456.5 Reference Sscrofa11.1 Primary Assembly

    Range
    113226589..113230038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005671398.2 → XP_005671455.1  elongation of very long chain fatty acids protein 3 isoform X1

    Conserved Domains (1) summary
    pfam01151
    Location:1 → 212
    ELO; GNS1/SUR4 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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