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CA14 carbonic anhydrase 14 [ Sus scrofa (pig) ]

Gene ID: 100153371, updated on 8-Mar-2024

Summary

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Official Symbol
CA14provided by VGNC
Official Full Name
carbonic anhydrase 14provided by VGNC
Primary source
VGNC:VGNC:86098
See related
Ensembl:ENSSSCG00000027875
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in longissimus dorsi muscle (RPKM 23.5), psoas major muscle (RPKM 15.8) and 3 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (98821577..98828934, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538109.2 (5462..13308)

Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene chromosome 4 C1orf54 homolog Neighboring gene circadian associated repressor of transcription Neighboring gene aph-1 homolog A, gamma-secretase subunit Neighboring gene acidic nuclear phosphoprotein 32 family member E Neighboring gene pleckstrin homology domain containing O1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonic anhydrase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

    Range
    98821577..98828934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021089918.1 → XP_020945577.1  carbonic anhydrase 14 isoform X4

    Conserved Domains (1) summary
    cl00012
    Location:56 → 219
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

  2. XM_021089915.1 → XP_020945574.1  carbonic anhydrase 14 isoform X1

    UniProtKB/TrEMBL
    A0A8D1GZQ7
    Conserved Domains (2) summary
    cl00012
    Location:56 → 305
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    cl23791
    Location:318 → 349
    UPF0154; Uncharacterized protein family (UPF0154)

  3. XM_021089917.1 → XP_020945576.1  carbonic anhydrase 14 isoform X3

    UniProtKB/TrEMBL
    A0A8D0X8Y6
    Conserved Domains (2) summary
    cl00012
    Location:25 → 274
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    cl23791
    Location:287 → 318
    UPF0154; Uncharacterized protein family (UPF0154)

  4. XM_021089916.1 → XP_020945575.1  carbonic anhydrase 14 isoform X2

    UniProtKB/TrEMBL
    A0A4X1SH73, A0A8D1GZQ7, I3L5M4
    Related
    ENSSSCP00000019323.3, ENSSSCT00000028733.4
    Conserved Domains (2) summary
    cl00012
    Location:29 → 278
    alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    cl23791
    Location:291 → 322
    UPF0154; Uncharacterized protein family (UPF0154)

RNA

  1. XR_002343445.1 RNA Sequence

  2. XR_002343447.1 RNA Sequence

  3. XR_002343446.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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