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CEP152 centrosomal protein 152 [ Sus scrofa (pig) ]

Gene ID: 100152345, updated on 8-Mar-2024

Summary

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Official Symbol
CEP152provided by VGNC
Official Full Name
centrosomal protein 152provided by VGNC
Primary source
VGNC:VGNC:110570
See related
Ensembl:ENSSSCG00000004657
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in ovary (RPKM 3.6), spleen (RPKM 2.2) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (122876146..122979851)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (136700802..136818062)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene SECIS binding protein 2 like Neighboring gene SHC adaptor protein 4 Neighboring gene EP300 interacting inhibitor of differentiation 1 Neighboring gene fibrillin 1 Neighboring gene uncharacterized LOC106506735

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 152 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    122876146..122979851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005659632.3 → XP_005659689.1  centrosomal protein of 152 kDa isoform X1

    See identical proteins and their annotated locations for XP_005659689.1

    UniProtKB/TrEMBL
    A0A8D1LKW9, A0A8D1XN02, F1SQG1
    Related
    ENSSSCP00000005016.4, ENSSSCT00000005142.4
    Conserved Domains (4) summary
    TIGR02168
    Location:255 → 942
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:263 → 355
    V_ATPase_I; V-type ATPase 116kDa subunit family
    pfam07851
    Location:1165 → 1245
    TMPIT; TMPIT-like protein
    cl21478
    Location:966 → 1063
    ATP-synt_B; ATP synthase B/B' CF(0)

  2. XM_021095942.1 → XP_020951601.1  centrosomal protein of 152 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8D0SZW6
    Conserved Domains (1) summary
    cl25732
    Location:242 → 929
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_005659635.3 → XP_005659692.1  centrosomal protein of 152 kDa isoform X6

    UniProtKB/TrEMBL
    A0A8D1LLF6
    Conserved Domains (4) summary
    TIGR02168
    Location:162 → 849
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:170 → 262
    V_ATPase_I; V-type ATPase 116kDa subunit family
    pfam07851
    Location:1072 → 1152
    TMPIT; TMPIT-like protein
    cl21478
    Location:873 → 970
    ATP-synt_B; ATP synthase B/B' CF(0)

  4. XM_013993032.2 → XP_013848486.1  centrosomal protein of 152 kDa isoform X7

    UniProtKB/TrEMBL
    A0A8D1LKW9, A0A8D1XN02
    Conserved Domains (4) summary
    TIGR02168
    Location:255 → 942
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:263 → 355
    V_ATPase_I; V-type ATPase 116kDa subunit family
    pfam07851
    Location:1165 → 1245
    TMPIT; TMPIT-like protein
    cl21478
    Location:966 → 1063
    ATP-synt_B; ATP synthase B/B' CF(0)

  5. XM_013993031.2 → XP_013848485.1  centrosomal protein of 152 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8D0MGU3, A0A8D0SXK5, A0A8D1L6C6, I3LGS4
    Related
    ENSSSCP00000023268.3, ENSSSCT00000029380.4
    Conserved Domains (3) summary
    TIGR02168
    Location:255 → 942
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:263 → 355
    V_ATPase_I; V-type ATPase 116kDa subunit family
    cl21478
    Location:966 → 1063
    ATP-synt_B; ATP synthase B/B' CF(0)

  6. XM_013993030.2 → XP_013848484.1  centrosomal protein of 152 kDa isoform X2

    UniProtKB/TrEMBL
    A0A8D1LKW9, A0A8D1XN02
    Conserved Domains (4) summary
    TIGR02168
    Location:254 → 941
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:262 → 354
    V_ATPase_I; V-type ATPase 116kDa subunit family
    pfam07851
    Location:1164 → 1244
    TMPIT; TMPIT-like protein
    cl21478
    Location:965 → 1062
    ATP-synt_B; ATP synthase B/B' CF(0)

  7. XM_021095980.1 → XP_020951639.1  centrosomal protein of 152 kDa isoform X8

    UniProtKB/TrEMBL
    A0A8D1LKW9, A0A8D1XN02
    Related
    ENSSSCP00000047842.3, ENSSSCT00000063098.3
    Conserved Domains (3) summary
    cl21478
    Location:965 → 1062
    ATP-synt_B; ATP synthase B/B' CF(0)
    cl25732
    Location:254 → 941
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26819
    Location:894 → 1002
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain

  8. XM_013993033.2 → XP_013848487.1  centrosomal protein of 152 kDa isoform X5

    UniProtKB/TrEMBL
    A0A8D0MGU3, A0A8D1L6C6
    Conserved Domains (3) summary
    TIGR02168
    Location:254 → 941
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:262 → 354
    V_ATPase_I; V-type ATPase 116kDa subunit family
    cl21478
    Location:965 → 1062
    ATP-synt_B; ATP synthase B/B' CF(0)

  9. XM_005659633.3 → XP_005659690.1  centrosomal protein of 152 kDa isoform X1

    See identical proteins and their annotated locations for XP_005659690.1

    UniProtKB/TrEMBL
    A0A8D1LKW9, A0A8D1XN02, F1SQG1
    Conserved Domains (4) summary
    TIGR02168
    Location:255 → 942
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam01496
    Location:263 → 355
    V_ATPase_I; V-type ATPase 116kDa subunit family
    pfam07851
    Location:1165 → 1245
    TMPIT; TMPIT-like protein
    cl21478
    Location:966 → 1063
    ATP-synt_B; ATP synthase B/B' CF(0)
Nucleotide Protein
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