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GPR162 G protein-coupled receptor 162 [ Equus caballus (horse) ]

Gene ID: 100146294, updated on 8-Mar-2024

Summary

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Official Symbol
GPR162provided by VGNC
Official Full Name
G protein-coupled receptor 162provided by VGNC
Primary source
VGNC:VGNC:18526
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GPR162 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (35319506..35325210)
102 previous assembly EquCab2.0 (GCF_000002305.2) 6 NC_009149.2 (34303182..34308836)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene CD4 molecule Neighboring gene uncharacterized LOC111773911 Neighboring gene uncharacterized LOC111773912 Neighboring gene uncharacterized LOC106783276 Neighboring gene prolyl 3-hydroxylase 3 Neighboring gene G protein subunit beta 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable G-protein coupled receptor 162

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    35319506..35325210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001915670.4 → XP_001915705.1  probable G-protein coupled receptor 162 isoform X1

    See identical proteins and their annotated locations for XP_001915705.1

    UniProtKB/TrEMBL
    F7A8D7
    Conserved Domains (2) summary
    cd14964
    Location:15 → 41
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:14 → 335
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_005610886.3 → XP_005610943.1  probable G-protein coupled receptor 162 isoform X2

    See identical proteins and their annotated locations for XP_005610943.1

    Conserved Domains (1) summary
    pfam00001
    Location:34 → 207
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Nucleotide Protein
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