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ZFP90 ZFP90 zinc finger protein [ Bos taurus (cattle) ]

Gene ID: 100139934, updated on 4-Jul-2020

Summary

Official Symbol
ZFP90provided by VGNC
Official Full Name
ZFP90 zinc finger proteinprovided by VGNC
Primary source
VGNC:VGNC:37169
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See ZFP90 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 18 NC_037345.1 (35882822..35905974)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 18 AC_000175.1 (36008069..36031380)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101907242 Neighboring gene sphingomyelin phosphodiesterase 3 Neighboring gene HIG1 domain family member 1A, mitochondrial pseudogene Neighboring gene cadherin 3 Neighboring gene cadherin 1 Neighboring gene transport and golgi organization 6 homolog Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

General gene information

Homology

Clone Names

  • MGC134475

General protein information

Preferred Names
zinc finger protein 90 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    35882822..35905974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005218864.4XP_005218921.1  zinc finger protein 90 homolog isoform X1

    See identical proteins and their annotated locations for XP_005218921.1

    Conserved Domains (6) summary
    smart00349
    Location:3999
    KRAB; krueppel associated box
    COG5048
    Location:359656
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:579599
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:633655
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:3978
    KRAB; KRAB box
    pfam13465
    Location:563588
    zf-H2C2_2; Zinc-finger double domain
  2. XM_002694906.5XP_002694952.2  zinc finger protein 90 homolog isoform X2

    See identical proteins and their annotated locations for XP_002694952.2

    UniProtKB/TrEMBL
    E1B960
    Conserved Domains (6) summary
    smart00349
    Location:1474
    KRAB; krueppel associated box
    COG5048
    Location:334631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:554574
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:608630
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:1453
    KRAB; KRAB box
    pfam13465
    Location:538563
    zf-H2C2_2; Zinc-finger double domain
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