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CXCL9 C-X-C motif chemokine ligand 9 [ Sus scrofa (pig) ]

Gene ID: 100135681, updated on 26-Jun-2026
Official Symbol
CXCL9provided by VGNC
Official Full Name
C-X-C motif chemokine ligand 9provided by VGNC
Primary source
VGNC:VGNC:87107
See related
Ensembl:ENSSSCG00000032777 RGD:14146900
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
MIG
Expression
Broad expression in spleen (RPKM 58.3), lung (RPKM 34.1) and 8 other tissues See more
Orthologs
all
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Try the new Transcripts and proteins table
See CXCL9 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2026_06 current Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0 (GCF_054392235.1) 8 NC_139390.1 (78086228..78090927, complement)
106 previous assembly Sscrofa11.1 (GCF_000003025.6) 8 NC_010450.4 (71665541..71670236, complement)

Chromosome 8 - NC_139390.1Genomic Context describing neighboring genes Neighboring gene N-acylethanolamine acid amidase Neighboring gene SDA1 domain containing 1 Neighboring gene ADP-ribosyltransferase 3 (inactive) Neighboring gene C-X-C motif chemokine ligand 10 Neighboring gene C-X-C motif chemokine ligand 11

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Related articles in PubMed

  1. Expressed gene sequence of the IFNγ-response chemokine CXCL9 of cattle, horses, and swine. Hudgens E, et al. Vet Immunol Immunopathol, 2011 Jun 15. PMID 21497916
  2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-X-C motif chemokine 9
Names
chemokine (C-X-C motif) ligand 9

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114289.2 → NP_001107761.2  C-X-C motif chemokine 9 precursor

    See identical proteins and their annotated locations for NP_001107761.2

    Status: PROVISIONAL

    Source sequence(s)
    EU364897
    UniProtKB/TrEMBL
    A0A287AQS6, A0A4X1SX95, B0FYK2
    Related
    ENSSSCP00000046312.1, ENSSSCT00000058978.3
    Conserved Domains (1) summary
    cd00273
    Location:28 → 91
    Chemokine_CXC; Chemokine_CXC: 1 of 4 subgroup designations based on the arrangement of the two N-terminal cysteine residues; includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; many members ...

RefSeqs of Annotated Genomes: GCF_054392235.1-RS_2026_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0

Genomic

  1. NC_139390.1 Reference Sscrofa_HxYL_maternal_Yorkshire_Landrace_v2.0

    Range
    78086228..78090927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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