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abcc3 ATP binding cassette subfamily C member 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100135090, updated on 20-Jun-2018

Summary

Symbol
abcc3provided by Xenbase
Full Name
ATP binding cassette subfamily C member 3provided by Xenbase
Primary source
Xenbase:XB-GENE-1003737
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
mlp2; mrp3; abc31; cmoat2; moat-d
Orthologs

Genomic context

See abcc3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
32
Annotation release Status Assembly Chr Location
103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (37478940..37532691)
102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668245.1 (2995703..3049406, complement)

Chromosome 10 - NC_030686.1Genomic Context describing neighboring genes Neighboring gene brain specific kinase 146 Neighboring gene uncharacterized LOC105945194 Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 Neighboring gene nuclear prelamin A recognition factor

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

General protein information

Preferred Names
canalicular multispecific organic anion transporter 2
Names
ATP-binding cassette, sub-family C (CFTR/MRP), member 3
multidrug resistance-associated protein 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113829.1NP_001107301.1  canalicular multispecific organic anion transporter 2

    See identical proteins and their annotated locations for NP_001107301.1

    Status: PROVISIONAL

    Source sequence(s)
    BC155696
    UniProtKB/TrEMBL
    A9JRK6
    Conserved Domains (4) summary
    TIGR00957
    Location:71530
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)
    cd03244
    Location:12911511
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:635836
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    pfam00664
    Location:9791244
    ABC_membrane; ABC transporter transmembrane region

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_tropicalis_v9.1 Primary Assembly

Genomic

  1. NC_030686.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Range
    37478940..37532691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012971517.2XP_012826971.1  canalicular multispecific organic anion transporter 2 isoform X1

    See identical proteins and their annotated locations for XP_012826971.1

    UniProtKB/TrEMBL
    A9JRK6
    Conserved Domains (4) summary
    TIGR00957
    Location:71530
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)
    cd03244
    Location:12911511
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:635836
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    pfam00664
    Location:9791244
    ABC_membrane; ABC transporter transmembrane region
  2. XM_012971518.2XP_012826972.1  canalicular multispecific organic anion transporter 2 isoform X2

    Conserved Domains (5) summary
    TIGR00957
    Location:71481
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)
    cd03244
    Location:12421462
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:586787
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    pfam00664
    Location:9301195
    ABC_membrane; ABC transporter transmembrane region
    cl00549
    Location:324558
    ABC_membrane; ABC transporter transmembrane region
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