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il7r interleukin 7 receptor [ Danio rerio (zebrafish) ]

Gene ID: 100134973, updated on 25-Nov-2021

Summary

Official Symbol
il7rprovided by ZNC
Official Full Name
interleukin 7 receptorprovided by ZNC
Primary source
ZFIN:ZDB-GENE-080110-7
See related
Ensembl:ENSDARG00000078970
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
il-7ra
Orthologs
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Genomic context

See il7r in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (22429368..22435947, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (22392696..22399311, complement)
103 previous assembly Zv9 (GCF_000002035.4) 21 NC_007132.5 (21381239..21387818, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene LMBR1 domain containing 2b Neighboring gene calcyphosine-like b Neighboring gene myosin VB Neighboring gene cilia and flagella associated protein 53

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables cytokine receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
interleukin-7 receptor subunit alpha
Names
interleukin 7 receptor alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113507.2NP_001106979.2  interleukin-7 receptor subunit alpha precursor

    Status: VALIDATED

    Source sequence(s)
    BN000775, CN018734, CU466287
    UniProtKB/TrEMBL
    A8WH87, E9QDP8
    Related
    ENSDARP00000119705.2, ENSDART00000137959.3

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    22429368..22435947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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