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SMIM9 small integral membrane protein 9 [ Homo sapiens (human) ]

Gene ID: 100132963, updated on 5-Jan-2022

Summary

Official Symbol
SMIM9provided by HGNC
Official Full Name
small integral membrane protein 9provided by HGNC
Primary source
HGNC:HGNC:41915
See related
Ensembl:ENSG00000203870
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CXorf68
Summary
Predicted to be located in plasma membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See SMIM9 in Genome Data Viewer
Location:
Xq28
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (154823348..154834662, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (154051623..154062937, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MAGUK p55 scaffold protein 1 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 37 Neighboring gene coagulation factor VIII Neighboring gene int22h-1 recombination region Neighboring gene microRNA 1184-1 Neighboring gene H2A.B variant histone 1 Neighboring gene coagulation factor VIII associated 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small integral membrane protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033065.1 RefSeqGene

    Range
    5001..16315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001162936.4NP_001156408.1  small integral membrane protein 9 precursor

    See identical proteins and their annotated locations for NP_001156408.1

    Status: VALIDATED

    Source sequence(s)
    AC109993
    Consensus CDS
    CCDS55546.1
    UniProtKB/Swiss-Prot
    A6NGZ8
    Related
    ENSP00000358542.1, ENST00000369529.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    154823348..154834662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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