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FAM25BP family with sequence similarity 25 member B, pseudogene [ Homo sapiens (human) ]

Gene ID: 100132929, updated on 18-Aug-2020

Summary

Official Symbol
FAM25BPprovided by HGNC
Official Full Name
family with sequence similarity 25 member B, pseudogeneprovided by HGNC
Gene description
protein FAM25
Primary source
HGNC:HGNC:23584
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM25A; FAM25B; FAM25C; FAM25G
Expression
Biased expression in skin (RPKM 12.0), esophagus (RPKM 1.7) and 2 other tissues See more

Genomic context

See FAM25BP in Genome Data Viewer
Location:
10q11.22
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (46369087..46373563)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (47177207..47181688, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ANTXR like Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 14, pseudogene Neighboring gene annexin A8 like 1 Neighboring gene long intergenic non-protein coding RNA 842 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 33

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104039.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC244230, BC146968, BF062320

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    46369087..46373563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001137556.2: Suppressed sequence

    Description
    NM_001137556.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
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