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GOLGA8F golgin A8 family member F [ Homo sapiens (human) ]

Gene ID: 100132565, updated on 5-Jan-2022

Summary

Official Symbol
GOLGA8Fprovided by HGNC
Official Full Name
golgin A8 family member Fprovided by HGNC
Primary source
HGNC:HGNC:32378
See related
Ensembl:ENSG00000153684
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in Golgi organization. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Restricted expression toward testis (RPKM 35.6) See more
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Genomic context

See GOLGA8F in Genome Data Viewer
Location:
15q13.1
Exon count:
21
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (28378621..28392021)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (28623784..28637167)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A6 family-like Neighboring gene MPHOSPH10 pseudogene 7 Neighboring gene RNA, 7SL, cytoplasmic 238, pseudogene Neighboring gene ABCB10 pseudogene 3 Neighboring gene microRNA 4509-2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • FLJ32679, FLJ59075, FLJ77521, MGC102859, MGC104696, MGC167066, DKFZp434P162

General protein information

Preferred Names
golgin A8 family member F
Names
golgi autoantigen, golgin subfamily a, 8F
golgin A8 family, member F pseudogene
golgin-like hypothetical protein LOC440321

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001350920.2NP_001337849.2  golgin A8 family member F

    Status: VALIDATED

    Source sequence(s)
    AC091304
    Consensus CDS
    CCDS86437.1
    Related
    ENSP00000456138.3, ENST00000526619.7
    Conserved Domains (1) summary
    COG1196
    Location:97399
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RNA

  1. NR_033351.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC091304
    Related
    ENST00000532622.8

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    28378621..28392021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024449811.1XP_024305579.1  golgin A8 family member F isoform X3

    Conserved Domains (1) summary
    pfam15070
    Location:21441
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  2. XM_024449810.1XP_024305578.1  golgin A8 family member F isoform X3

    Conserved Domains (1) summary
    pfam15070
    Location:21441
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  3. XM_024449808.1XP_024305576.1  golgin A8 family member F isoform X1

    Conserved Domains (2) summary
    pfam15070
    Location:239659
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
    cl25732
    Location:107352
    SMC_N; RecF/RecN/SMC N terminal domain
  4. XM_024449809.1XP_024305577.1  golgin A8 family member F isoform X2

    Conserved Domains (2) summary
    pfam15070
    Location:238658
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
    cl25732
    Location:107351
    SMC_N; RecF/RecN/SMC N terminal domain
  5. XM_024449812.1XP_024305580.1  golgin A8 family member F isoform X4

    Conserved Domains (1) summary
    pfam15070
    Location:21420
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  6. XM_024449813.1XP_024305581.1  golgin A8 family member F isoform X4

    Conserved Domains (1) summary
    pfam15070
    Location:21420
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

RNA

  1. XR_002957623.1 RNA Sequence

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p13 PATCHES

    Range
    512034..525416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NW_003315943.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    66564..79946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    625820..639202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012452.2: Suppressed sequence

    Description
    NM_001012452.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
  2. NM_001164328.1: Suppressed sequence

    Description
    NM_001164328.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
  3. NR_033352.1: Suppressed sequence

    Description
    NR_033352.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
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