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GAGE12D G antigen 12D [ Homo sapiens (human) ]

Gene ID: 100132399, updated on 12-Oct-2019

Summary

Official Symbol
GAGE12Dprovided by HGNC
Official Full Name
G antigen 12Dprovided by HGNC
Primary source
HGNC:HGNC:31904
See related
Ensembl:ENSG00000227488 MIM:300728
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GAGE-12B
Expression
Restricted expression toward testis (RPKM 125.3) See more

Genomic context

See GAGE12D in Genome Data Viewer
Location:
Xp11.23
Exon count:
5
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (49541722..49549107)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (49306325..49313710)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene G antigen 12B Neighboring gene G antigen 12C Neighboring gene G antigen 12E Neighboring gene G antigen 12F

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
G antigen 12B/C/D/E
Names
GAGE-12D
g antigen 12C/D/E

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127199.1NP_001120671.1  G antigen 12B/C/D/E

    See identical proteins and their annotated locations for NP_001120671.1

    Status: VALIDATED

    Source sequence(s)
    AC142497
    Consensus CDS
    CCDS48113.1
    UniProtKB/Swiss-Prot
    A1L429
    Related
    ENSP00000384214.3, ENST00000405679.3
    Conserved Domains (1) summary
    pfam05831
    Location:1111
    GAGE; GAGE protein

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    49541722..49549107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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