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CLUHP3 clustered mitochondria homolog pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100132341, updated on 23-Nov-2021

Summary

Official Symbol
CLUHP3provided by HGNC
Official Full Name
clustered mitochondria homolog pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:28447
See related
Ensembl:ENSG00000131797
Gene type
pseudo
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
URLC3; C16orf67; KIAA0664L3; KIAA0664P3
Expression
Ubiquitous expression in lymph node (RPKM 5.2), thyroid (RPKM 4.9) and 25 other tissues See more
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Genomic context

See CLUHP3 in Genome Data Viewer
Location:
16p11.2
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (31700613..31707437)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (31711934..31718758)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 66 pseudogene Neighboring gene RNA binding motif protein 22 pseudogene 12 Neighboring gene KRAB box domain containing 5 Neighboring gene uncharacterized LOC107983990

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • KIAA0664-like 3
  • clustered mitochondria (cluA/CLU1) homolog pseudogene 3
  • up-regulated in lung cancer 3

Clone Names

  • MGC3020, FLJ30136, KIAA0664, MGC31812

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024034.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC021555
    Related
    ENST00000254109.9

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    31700613..31707437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_026408.1: Suppressed sequence

    Description
    NG_026408.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
  2. NM_024048.2: Suppressed sequence

    Description
    NM_024048.2: This RefSeq was permanently suppressed because it is a nonsense-mediated decay (NMD) candidate.
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