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LINC01783 long intergenic non-protein coding RNA 1783 [ Homo sapiens (human) ]

Gene ID: 100132147, updated on 29-Mar-2020

Summary

Official Symbol
LINC01783provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1783provided by HGNC
Primary source
HGNC:HGNC:52573
See related
Ensembl:ENSG00000233421
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 4.8), lung (RPKM 0.5) and 2 other tissues See more

Genomic context

See LINC01783 in Genome Data Viewer
Location:
1p36.13
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (16533891..16535652, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16860691..16862580, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, U1 small nuclear 1 Neighboring gene tRNA-Asn (anticodon GTT) 5-1 Neighboring gene tRNA-Glu (anticodon TTC) 4-1 Neighboring gene RNA, U1 small nuclear 6, pseudogene Neighboring gene tRNA-Gly (anticodon CCC) 1-1 Neighboring gene tRNA-Val (anticodon CAC) 11-1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • MGC161618

Gene Ontology Provided by GOA

Function Evidence Code Pubs
triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
translation IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135764.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL355149
    Related
    ENST00000415386.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    16533891..16535652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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