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C2CD4D-AS1 C2CD4D and THEM5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100132111, updated on 24-Jul-2021

Summary

Official Symbol
C2CD4D-AS1provided by HGNC
Official Full Name
C2CD4D and THEM5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:54045
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in brain (RPKM 2.5), kidney (RPKM 1.8) and 21 other tissues See more
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Genomic context

See C2CD4D-AS1 in Genome Data Viewer
Location:
1q21.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (151838277..151851535)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (151810753..151824011)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and Ig domain containing 4 Neighboring gene RAR related orphan receptor C Neighboring gene C2 calcium dependent domain containing 4D Neighboring gene thioesterase superfamily member 5 Neighboring gene thioesterase superfamily member 4 Neighboring gene keratin 8 pseudogene 28

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024237.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL450992, AL589765
  2. NR_152846.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL450992, AL589765

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    151838277..151851535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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