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FAM27E3 family with sequence similarity 27 member E3 [ Homo sapiens (human) ]

Gene ID: 100131997, updated on 17-Jun-2024

Summary

Official Symbol
FAM27E3provided by HGNC
Official Full Name
family with sequence similarity 27 member E3provided by HGNC
Primary source
HGNC:HGNC:28655
See related
Ensembl:ENSG00000274026 AllianceGenome:HGNC:28655
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 5.4), kidney (RPKM 2.3) and 21 other tissues See more
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Genomic context

See FAM27E3 in Genome Data Viewer
Location:
9q21.11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (67717498..67719179, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (79500184..79501865, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (67784944..67786625, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379453 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:67756597-67757414 Neighboring gene uncharacterized LOC102723709 Neighboring gene family with sequence similarity 27 member B Neighboring gene ReSE screen-validated silencer GRCh37_chr9:45710113-45710280 Neighboring gene RNA, 7SL, cytoplasmic 787, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103833.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC032035, BC119675, BC127258
    Related
    ENST00000418795.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    67717498..67719179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    79500184..79501865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)