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CCDC18-AS1 CCDC18 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100131564, updated on 24-Jul-2021

Summary

Official Symbol
CCDC18-AS1provided by HGNC
Official Full Name
CCDC18 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:52262
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 7.3), lymph node (RPKM 7.2) and 24 other tissues See more
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Genomic context

See CCDC18-AS1 in Genome Data Viewer
Location:
1p22.1
Exon count:
9
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (93310109..93345811, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (93775666..93811368, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 18 Neighboring gene uncharacterized LOC107985521 Neighboring gene ribosomal protein L39 pseudogene Neighboring gene down-regulator of transcription 1 Neighboring gene F-box and WD repeat domain containing 11 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • ENST00000440778.1

Clone Names

  • FLJ42965

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_034089.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL137159

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    93310109..93345811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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